EcoDrugPlus


Keyword(s):	Human Metabolites
Molecule Category	Free-form
UNII	3P99H114B8
EPA CompTox	DTXSID9023093

Keyword(s):

Human Metabolites

Molecule Category

Free-form

UNII

3P99H114B8

EPA CompTox

DTXSID9023093


InChI Key	XUFIWSHGXVLULG-IBLUXPFWSA-N
Smiles	CC([C@@H]1CC[C@H]([C@H](O1)O[C@@H]2[C@H](C[C@H]([C@@H]([C@H]2O)O[C@@H]3[C@@H]([C@H]([C@@](CO3)(C)O)NC)O)N)N)N)N
InChI	InChI=1S/C20H41N5O7/c1-8(21)12-5-4-9(22)18(30-12)31-15-10(23)6-11(24)16(13(15)26)32-19-14(27)17(25-3)20(2,28)7-29-19/h8-19,25-28H,4-7,21-24H2,1-3H3/t8?,9-,10+,11-,12+,13+,14-,15-,16+,17-,18-,19-,20+/m1/s1

InChI Key

XUFIWSHGXVLULG-IBLUXPFWSA-N

Smiles

CC([C@@H]1CC[C@H]([C@H](O1)O[C@@H]2[C@H](C[C@H]([C@@H]([C@H]2O)O[C@@H]3[C@@H]([C@H]([C@@](CO3)(C)O)NC)O)N)N)N)N

InChI

InChI=1S/C20H41N5O7/c1-8(21)12-5-4-9(22)18(30-12)31-15-10(23)6-11(24)16(13(15)26)32-19-14(27)17(25-3)20(2,28)7-29-19/h8-19,25-28H,4-7,21-24H2,1-3H3/t8?,9-,10+,11-,12+,13+,14-,15-,16+,17-,18-,19-,20+/m1/s1

Property Name	Value
Molecular Formula	C20H41N5O7
Molecular Weight	463.3
AlogP	-3.59
Hydrogen Bond Acceptor	12.0
Hydrogen Bond Donor	8.0
Number of Rotational Bond	6.0
Polar Surface Area	213.72
Heavy Atoms	32.0

Property Name

Value

Molecular Formula

C20H41N5O7

Molecular Weight

463.3

AlogP

-3.59

Hydrogen Bond Acceptor

12.0

Hydrogen Bond Donor

8.0

Number of Rotational Bond

6.0

Polar Surface Area

213.72

Heavy Atoms

32.0

Resources	Reference
CAS NUMBER	25876-11-3
NORMAN SUSDAT
FDA SRS	3P99H114B8
PubChem	5284563
ChemSpider	4447617.0

Resources

Reference

CAS NUMBER

25876-11-3

NORMAN SUSDAT

FDA SRS

3P99H114B8

PubChem

5284563

ChemSpider

4447617.0

EcoDrug+ was developed under the PREMIER Innovative Medicines Initiative 2 Joint Undertaking (JU) under grant agreement No 875508. The JU receives support from the EU’s Horizon 2020 research and innovation programme and the European Federation of Pharmaceutical Industries and Associations (EFPIA). The views reflect only the authors’ perspective and the JU is not responsible for any use that may be made of the information EcoDrug+ contains.

Elements of EcoDrug+ were developed under the Biocenter Finland Drug Discovery and Chemical Biology network. CSC-IT Center for Science Ltd is thanked for providing computational resources. Credit is given to Ensembl for collecting species images (provided under public domain licences such as Wikimedia and NHGRI).

Content of EcoDrug+ is provided without guarantee for correctness.

Cite Us:

Ashenafi Legehar, Siobhán Monaghan, Mael Briand, Akseli Niemelä, Leo Ghemtio, Ziaurrehman Tanoli, A Ross Brown, Charles R Tyler, Henri Xhaard, EcoDrug PLUS: an advanced database for drug target conservation analysis and environmental risk assessment, Nucleic Acids Research, Volume 54, Issue D1, 6 January 2026, Pages D1397–D1404, https://doi.org/10.1093/nar/gkaf1251

This work is licensed under Creative Commons Attribution-ShareAlike 4.0 International License

Last update: Monday, 3 November 2025

GENTAMICIN C2

Structure

Physicochemical Descriptors

Cross References