(PYRIDIN-2-YLMETHYLAMINO)METHYLENEDIPHOSPHONIC ACID

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Search structure


Molecule Category	Free-form
Source	Gaulton A, Kale N, van Westen GJ, Bellis LJ, Bento AP, Davies M, Hersey A, Papadatos G, Forster M, Wege P, Overington JP. A large-scale crop protection bioassay data set. Sci Data. 2015 Jul 7;2:150032. Read more ...


Active Pharmaceutical Ingredients Bioactive chemicals	Exact Similarity SubStructure	Threshold (%) >= 70

Structure


InChI Key	HDXOAQWBNPGAFA-UHFFFAOYSA-N
Smiles	OP(=O)(O)C(NCc1ccccn1)P(=O)(O)O
InChI	InChI=1S/C7H12N2O6P2/c10-16(11,12)7(17(13,14)15)9-5-6-3-1-2-4-8-6/h1-4,7,9H,5H2,(H2,10,11,12)(H2,13,14,15)

Physicochemical Descriptors

Property Name	Value
Molecular Formula	C7H12N2O6P2
Molecular Weight	282.13
AlogP	-0.32
Hydrogen Bond Acceptor	8.0
Hydrogen Bond Donor	5.0
Number of Rotational Bond	5.0
Polar Surface Area	159.6
Molecular species	ACID
Aromatic Rings	1.0
Heavy Atoms	17.0

Assay Description	Organism	Bioactivity	Reference
Inhibition of Arabidopsis thaliana P5C reductase catalytic activity assessed as inhibition of NADPH oxidation at 340 nm OD at 0.2 mM by NADPH oxidation assay	Arabidopsis thaliana	118.0 %
Inhibition of Arabidopsis thaliana P5C reductase catalytic activity assessed as residual concentration of enzyme at 535 nm OD at 0.5 mM by P5C utilization assay	Arabidopsis thaliana	92.9 %
Inhibition of Oryza sativa cv. Gigante vercellese (rice) glutamine synthetase assessed as inhibition of glutamine synthesis from glutamic acid at 1 mM after 15 min by biosynthetic assay	Oryza sativa	8.8 %
Inhibition of Oryza sativa cv. Gigante vercellese (rice) glutamine synthetase at 1 mM after 30 min by hemibiosynthetic assay	Oryza sativa	16.1 %
Inhibition of Oryza sativa cv. Gigante vercellese (rice) glutamine synthetase at 1 mM by transferase assay	Oryza sativa	54.6 %
Effect on amino acid pool in Oryza sativa cv. Gigante vercellese (rice) cells assessed as total amino acid content per gram fresh weight of culture at 0.5 mM after 48 hr (Rvb = 24.65 +/- 0.97 umol)	Oryza sativa	26.94 %
Effect on amino acid pool in Oryza sativa cv. Gigante vercellese (rice) cells assessed as glutamine content per gram fresh weight of culture at 0.5 mM after 48 hr (Rvb = 4.24 +/- 0.35 umol)	Oryza sativa	3.25 %
Effect on amino acid pool in Oryza sativa cv. Gigante vercellese (rice) cells assessed as serine content per gram freshweight of culture at 0.5 mM after 48 hr (Rvb = 0.60 +/- 0.09 umol)	Oryza sativa	1.53 %
Effect on amino acid pool in Oryza sativa cv. Gigante vercellese (rice) cells assessed as asparagine content per gram freshweight of culture at 0.5 mM after 48 hr (Rvb = 3.18 +/- 0.25 umol)	Oryza sativa	0.63 %
Effect on amino acid pool in Oryza sativa cv. Gigante vercellese (rice) cells assessed as glutamic acid content per gram freshweight of culture at 0.5 mM after 48 hr (Rvb = 0.75 +/- 0.07 umol)	Oryza sativa	4.78 %
Effect on amino acid pool in Oryza sativa cv. Gigante vercellese (rice) cells assessed as aspartic acid content per gram freshweight of culture at 0.5 mM after 48 hr (Rvb = 1.10 +/- 0.26 umol)	Oryza sativa	1.66 %
Inhibition of Oryza sativa cv. Gigante vercellese (rice) glutamine synthetase assessed as inhibition of glutamine synthesis from glutamic acid after 15 min by biosynthetic assay	Oryza sativa	64000.0 nM
Inhibition of Oryza sativa cv. Gigante vercellese (rice) glutamine synthetase after 30 min by hemibiosynthetic assay	Oryza sativa	103000.0 nM
Inhibition of Oryza sativa cv. Gigante vercellese (rice) glutamine synthetase by transferase assay	Oryza sativa	1130000.0 nM

Cross References

Resources	Reference
ChEMBL	CHEMBL2251373
PubChem	15239453

CONTENTS

PREMIER has received funding from the Innovative Medicines Initiative 2 Joint Undertaking (JU) under grant agreement No 875508. The JU receives support from the EU’s Horizon 2020 research and innovation programme and the European Federation of Pharmaceutical Industries and Associations (EFPIA). The views reflect only the authors’ perspective and the JU is not responsible for any use that may be made of the information this manuscript contains.

Elements of the website have been developed under projects PREMIER and the Biocenter Finland Drug Discovery and Chemical Biology network. CSC-IT is thanked for providing computational resources. Content of the website is provided without guarantee for correctness. Data has been collected and integrated from multiple public sources, for the largest: FDA, HUGO Gene Nomenclature Committee, ChEMBL, IUPHAR/BPS guide to pharmacology, Reactome, UniProt, and Ensembl. Credit is given to Ensembl for collecting species images (provided under public domain licences such as Wikimedia and NHGRI).