Structure

InChI Key FJHBVJOVLFPMQE-QFIPXVFZSA-N
Smiles CCc1c2c(nc3ccc(O)cc13)-c1cc3c(c(=O)n1C2)COC(=O)[C@]3(O)CC
InChI
InChI=1S/C22H20N2O5/c1-3-12-13-7-11(25)5-6-17(13)23-19-14(12)9-24-18(19)8-16-15(20(24)26)10-29-21(27)22(16,28)4-2/h5-8,25,28H,3-4,9-10H2,1-2H3/t22-/m0/s1

Physicochemical Descriptors

Property Name Value
Molecular Formula C22H20N2O5
Molecular Weight 392.41
AlogP 2.35
Hydrogen Bond Acceptor 7.0
Hydrogen Bond Donor 2.0
Number of Rotational Bond 2.0
Polar Surface Area 101.65
Molecular species NEUTRAL
Aromatic Rings 3.0
Heavy Atoms 29.0

Bioactivity

Mechanism of Action Action Reference
DNA topoisomerase I inhibitor INHIBITOR Other DailyMed
Protein: DNA topoisomerase I

Description: DNA topoisomerase 1

Organism : Homo sapiens

P11387 ENSG00000198900
Targets EC50(nM) IC50(nM) Kd(nM) Ki(nM) Inhibition(%)
Enzyme Cytochrome P450 Cytochrome P450 family 3 Cytochrome P450 family 3A Cytochrome P450 3A4
- - - 26000 -
Enzyme Hydrolase
- - - - 13
Enzyme Isomerase
70-320 1000-5500 - - 1
Enzyme Transferase
- - - - 40
Assay Description Organism Bioactivity Reference
Percent inhibition of acetylcholinesterase using ATCh1 as a substrate Homo sapiens 13.0 %
Antiproliferative activity against human DU145 prostate cell line Homo sapiens 13.0 nM
In vitro antitumor activity against HOC-21 (human ovarian cancer) cells. Homo sapiens 0.0412 ug.mL-1
Tested in vitro for the inhibition of HOC-21(human ovarian cancer) cell line by MTT assay Homo sapiens 0.1231 ug.mL-1
In vitro inhibitory concentration required against HT-29 human colon cancer cells Homo sapiens 27.3 nM
Antiproliferative activity against human HT-29 colon cell line Homo sapiens 22.0 nM
Inhibitory activity in mice bearing L1210 leukemia Mus musculus 8.9 nM
Inhibition against MDA-MB-435 S human breast cancer cells in the absence of albumin Homo sapiens 5.0 nM
Inhibition against MDA-MB-435 S human breast cancer cells in the presence of 30 mg/mL HSA Homo sapiens 50.0 nM
Antiproliferative activity against human MCF-7 breast cell line Homo sapiens 370.0 nM
Cytotoxicity against human non-small-cell lung carcinoma cell line H460 (NSCLC-H460) Homo sapiens 80.0 nM
In vitro antitumor activity against P388 (murine leukemia) cells. Mus musculus 0.00144 ug.mL-1
Tested in vitro for the inhibition of P388 (mouse leukemia) cell line by MTT assay; 1.95-6.93 ng/mL Mus musculus 0.00693 ug.mL-1
In vitro antitumor activity against QG-56 (human lung cancer) cells. Homo sapiens 0.0009 ug.mL-1
Tested in vitro for the inhibition of QG-56 (human lung squamous cell carcinoma) cell line by MTT assay Homo sapiens 0.00317 ug.mL-1
Antiproliferative activity against human SKOV-3 ovarian cell line Homo sapiens 720.0 nM
In Vitro cytotoxicity against human breast cancer cell line (SK-BR-3) Homo sapiens 4.0 nM
In Vitro cytotoxicity against human colon cancer cell line (WiDr) Homo sapiens 14.0 nM
In Vitro cytotoxicity against human lung cancer cell line (A549) Homo sapiens 16.0 nM
In Vitro cytotoxicity against human lung cancer cell line (H128) Homo sapiens 6.0 nM
In Vitro cytotoxicity against human ovarian cancer cell line (SK-OV-3) Homo sapiens 11.0 nM
In Vitro cytotoxicity against human stomach cancer cell line (MKN45) Homo sapiens 8.0 nM
Effective concentration against DNA topoisomerase I Homo sapiens 320.0 nM Effective concentration against DNA topoisomerase I Homo sapiens 70.0 nM
Inhibitory concentration against human HCT116 colon cancer cell line Homo sapiens 7.0 nM
Concentration required to inhibit growth of human cervical HeLa carcinoma cell line Homo sapiens 25.7 nM Concentration required to inhibit growth of human cervical HeLa carcinoma cell line Homo sapiens 38.8 nM
Concentration required to inhibit growth of human prostate PC-3 carcinoma cell line Homo sapiens 35.6 nM Concentration required to inhibit growth of human prostate PC-3 carcinoma cell line Homo sapiens 35.3 nM
In-vitro inhibitory concentration for human tumor HELA cell-line was determined using MTT assay after 3 days of incubation Homo sapiens 22.0 nM
In-vitro inhibitory concentration for human tumor HL60 cell-line was determined using SRB assay after 3 days of incubation Homo sapiens 19.0 nM
In-vitro inhibitory concentration for human tumor HCT116 cell-line was determined using MTT assay after 3 days of incubation Homo sapiens 3.3 nM
In-vitro inhibitory concentration for human tumor BEL-7402 cell-line was determined using MTT assay after 3 days of incubation Homo sapiens 13.0 nM
In vitro inhibitory concentration against human lung large cell carcinoma cell line, H460 (after 1 hour exposure) Homo sapiens 210.0 nM
Inhibition of human H460 cell growth Homo sapiens 80.0 nM
Antiproliferative activity against human DU145 cells after 96 hrs Homo sapiens 4.0 nM
Antiproliferative activity against human MIA PaCa cells after 96 hrs Homo sapiens 6.0 nM
Antiproliferative activity against human HT29 cells after 96 hrs Homo sapiens 12.0 nM
Antiproliferative activity against human H460 cells after 1 hr of drug exposure measured after 72 hrs Homo sapiens 220.0 nM
Antiproliferative activity against human HT29 cells after 1 hr of drug exposure measured after 72 hrs Homo sapiens 670.0 nM
Cytotoxicity against human H460 cells Homo sapiens 220.0 nM
Antiproliferative activity against human NCI-H460 cells after short term exposure for 1 hr measured after 72 hrs in drug-free medium Homo sapiens 130.0 nM
Cytotoxicity against human A549 cells by SRB method Homo sapiens 80.0 nM
Cytotoxicity against human HT-29 cells by SRB method Homo sapiens 120.0 nM
Cytotoxicity against human KB3-1 cells after 4 days by MTT method Homo sapiens 4.0 nM
Cytotoxicity against MDR1 overexpressing human KBV1 cells after 4 days by MTT method Homo sapiens 46.0 nM
Cytotoxicity against BCRP overexpressing human KBH5.0 cells after 4 days by MTT method Homo sapiens 300.0 nM
Antiproliferative activity against human HCT116 cells after 3 days Homo sapiens 0.55 nM
Antiproliferative activity against human QG56 cells after 3 days Homo sapiens 2.8 nM
Antiproliferative activity against human NCI-H460 cells after 3 days Homo sapiens 3.3 nM
Antiproliferative activity against human PC6 expressing BCRP cells after 6 days Homo sapiens 5.1 nM
Antiproliferative activity against human PC6 cells carrying pRC after 6 days Homo sapiens 0.43 nM
Antitumor activity against human A549/ATCC cells by SRB method Homo sapiens 88.0 nM
Antitumor activity against human HT-29 cells by SRB method Homo sapiens 170.0 nM
Cytotoxicity against human A549 cells Homo sapiens 47.0 nM
Cytotoxicity against human HT-29 cells Homo sapiens 5.9 nM
TP_TRANSPORTER: drug resistance(Imatinib mesylate) in BCRP-expressing SaoS2 cells None 176.0 nM
Cytotoxicity against human PC3 cells expressing alpha5beta3 integrin assessed as cell survival after 72 hrs by SRB assay Homo sapiens 2.6 nM
Cytotoxicity against human A2780 cells overexpressing alpha5beta3 integrin assessed as cell survival after 72 hrs by SRB assay Homo sapiens 9.0 nM
Cytotoxicity against human DU145 cells Homo sapiens 30.0 nM
Cytotoxicity against human HT-29 cells Homo sapiens 30.0 nM
Inhibition of topoisomerase 1 (unknown origin)-mediated DNA cleavage at 1 uM relative to SN-38 Homo sapiens 1.0 %
Cytotoxicity against mouse L1210 cells Mus musculus 40.0 nM
Cytotoxicity against human DU145 cells assessed as inhibition of cell viability after 72 hrs by MTS assay Homo sapiens 110.0 nM
Cytotoxicity against human HT-29 cells assessed as growth inhibition after 3 days by SRB assay Homo sapiens 106.67 nM
Cytotoxicity against human HCT116 cells assessed as growth inhibition after 3 days by SRB assay Homo sapiens 31.0 nM
Cytotoxicity against human A549 cells assessed as growth inhibition after 3 days by SRB assay Homo sapiens 2.72 nM
Cytotoxicity against human A549 cells Homo sapiens 259.0 nM
Cytotoxicity against human HCT116 cells Homo sapiens 166.0 nM
Cytotoxicity against human MDA-MB-231 cells Homo sapiens 176.0 nM
Cytotoxicity against human HCT116 cells after 72 hrs by sulforhodamine B assay Homo sapiens 4.28 nM
Cytotoxicity against human HT-29 cells after 72 hrs by sulforhodamine B assay Homo sapiens 18.54 nM
Inhibition of human recombinant UGT1A1 expressed in HEK293 cells assessed as reduction in estradiol 3-glucuronidation using 4 to 75 uM estradiol by LC-MS/MS method Homo sapiens 40.0 %
Cytotoxicity against human HCT15 cells assessed as growth inhibition after 72 hrs by SRB assay Homo sapiens 8.0 nM
Cytotoxicity against human HT-29 cells assessed as growth inhibition after 72 hrs by SRB assay Homo sapiens 54.0 nM
Cytotoxicity against human MCF7 cells assessed as growth inhibition after 72 hrs by SRB assay Homo sapiens 515.0 nM
Cytotoxicity against human U87MG cells assessed as growth inhibition after 72 hrs by SRB assay Homo sapiens 30.0 nM
Cytotoxicity against human U251 cells assessed as growth inhibition after 72 hrs by SRB assay Homo sapiens 21.0 nM
Antiproliferative activity against human PANC1 cells after 96 hrs by CellTiter-Glo luminescence assay Homo sapiens 82.5 nM
Cytotoxicity against human NCI-H460 cells pretreated for 24 hrs under hypoxic condition followed by compound washout measured after 72 hrs by MTT assay Homo sapiens 60.0 nM
Cytotoxicity against human NCI-H460 cells pretreated for 24 hrs under normoxic condition followed by compound washout measured after 72 hrs by MTT assay Homo sapiens 50.0 nM
Cytotoxicity against human NCI-H460 cells assessed as growth reduction under normoxic condition after 72 hrs by MTT assay Homo sapiens 50.0 nM
Cytotoxicity against human NCI-H460 cells assessed as growth reduction under hypoxic condition after 72 hrs by MTT assay Homo sapiens 47.0 nM
Cytotoxicity against human HT-29 cells assessed as growth reduction under normoxic condition after 72 hrs by MTT assay Homo sapiens 96.0 nM
Cytotoxicity against human HT-29 cells assessed as growth reduction under hypoxic condition after 72 hrs by MTT assay Homo sapiens 119.0 nM
Cytotoxicity against human MCF7 cells after 72 hrs by sulforhodamine B assay Homo sapiens 0.1 nM
Cytotoxicity against human A549 cells after 72 hrs by sulforhodamine B assay Homo sapiens 200.0 nM
Antiproliferative activity against human A549 cells after 72 hrs by SRB assay Homo sapiens 1.62 nM
Antiproliferative activity against human HCT116 cells after 72 hrs by SRB assay Homo sapiens 0.78 nM
Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of Caco-2 cells at 10 uM after 48 hours by high content imaging Homo sapiens -28.1 %
Cytotoxicity against human HepG2 cells after 72 hrs by MTT assay Homo sapiens 480.0 nM
Antiproliferative activity against human A549 cells assessed as reduction in cell viability after 72 hrs by SRB assay Homo sapiens 11.0 nM
Antiproliferative activity against human HCT116 cells assessed as reduction in cell viability after 72 hrs by SRB assay Homo sapiens 4.0 nM
Antiproliferative activity against human MIAPaCa2 cells assessed as reduction in cell viability after 72 hrs by SRB assay Homo sapiens 13.0 nM
Antiproliferative activity against human Capan1 cells assessed as reduction in cell viability after 72 hrs by SRB assay Homo sapiens 8.0 nM
Cytotoxicity agains human HL7702 cells assessed as reduction in cell viability after 72 hrs by SRB assay Homo sapiens 18.0 nM
SARS-CoV-2 3CL-Pro protease inhibition percentage at 20µM by FRET kind of response from peptide substrate Severe acute respiratory syndrome coronavirus 2 25.05 % SARS-CoV-2 3CL-Pro protease inhibition percentage at 20µM by FRET kind of response from peptide substrate Severe acute respiratory syndrome coronavirus 2 9.29 % SARS-CoV-2 3CL-Pro protease inhibition percentage at 20µM by FRET kind of response from peptide substrate Severe acute respiratory syndrome coronavirus 2 -0.04081 %
Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus -0.02 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus -0.12 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus -0.08 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus -0.02 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus -0.08 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus -0.12 %
Cytotoxicity against human C3PV cells assessed as reduction in cell viability measured after 24 hrs by MTT assay Homo sapiens 510.0 nM
Cytotoxicity against human RPMI7951 cells assessed as reduction in cell viability measured after 24 hrs by MTT assay Homo sapiens 260.0 nM
Cytotoxicity against human SK-MEL-24 cells assessed as reduction in cell viability measured after 24 hrs by MTT assay Homo sapiens 480.0 nM
Cytotoxicity against FR-positive human SKHEP1 cells assessed as reduction in cell viability measured after 72 hrs by MTT assay Homo sapiens 300.0 nM
Cytotoxicity against FR-positive human HeLa cells assessed as reduction in cell viability measured after 72 hrs by MTT assay Homo sapiens 300.0 nM
Cytotoxicity against FR-positive human SiHa cells assessed as reduction in cell viability measured after 72 hrs by MTT assay Homo sapiens 300.0 nM
Cytotoxicity against human 16HBE cells assessed as reduction in cell viability measured after 72 hrs by MTT assay Homo sapiens 300.0 nM
Cytotoxicity against FR-negative human A549 cells assessed as reduction in cell viability measured after 72 hrs by MTT assay Homo sapiens 300.0 nM
Cytotoxicity against human A549 assessed as reduction in cell viability measured after 72 hrs by MTT assay Homo sapiens 18.0 nM
Cytotoxicity against human HCT-116 assessed as reduction in cell viability measured after 72 hrs by MTT assay Homo sapiens 10.0 nM
Cytotoxicity against human LoVo assessed as reduction in cell viability measured after 72 hrs by MTT assay Homo sapiens 301.0 nM
Cytotoxicity against human COLO 205 assessed as reduction in cell viability measured after 72 hrs by MTT assay Homo sapiens 220.0 nM
Cytotoxicity against human Raji assessed as reduction in cell viability measured after 72 hrs by MTT assay Homo sapiens 5.0 nM
Cytotoxicity against human Hela assessed as reduction in cell viability measured after 72 hrs by MTT assay Homo sapiens 145.0 nM
Cytotoxicity against human NCI-H1975 assessed as reduction in cell viability measured after 72 hrs by MTT assay Homo sapiens 810.0 nM
Cytotoxicity against human MCF7 cells assessed as inhibition of cell growth measured after 72 hrs Homo sapiens 660.0 nM
Cytotoxicity against human HT-29 cells assessed as inhibition of cell growth measured after 72 hrs Homo sapiens 20.0 nM
Cytotoxicity against human HL-60 cells assessed as inhibition of cell growth measured after 72 hrs Homo sapiens 2.0 nM
Cytotoxicity against human A549 cells assessed as inhibition of cell growth measured after 72 hrs Homo sapiens 28.0 nM
Cytotoxicity against human HeLa cells assessed as reduction in cell viability incubated for 24 hrs by MTT assay Homo sapiens 349.0 nM

Related Entries

Cross References

Resources Reference
ChEBI 8988
ChEMBL CHEMBL837
DrugBank DB05482
FDA SRS 0H43101T0J
Human Metabolome Database HMDB0060510
Guide to Pharmacology 6925
KEGG C11173
PDB RS4
PubChem 104842
SureChEMBL SCHEMBL34018
ZINC ZINC000004099013