Synonyms
Status
Molecule Category UNKNOWN
UNII 1A7Y9MP123
EPA CompTox DTXSID00143784

Structure

InChI Key PLIVFNIUGLLCEK-UHFFFAOYSA-N
Smiles C#Cc1cccc(Nc2ncnc3cc(OC)c(OCCCCCCC(=O)NO)cc23)c1
InChI
InChI=1S/C24H26N4O4/c1-3-17-9-8-10-18(13-17)27-24-19-14-22(21(31-2)15-20(19)25-16-26-24)32-12-7-5-4-6-11-23(29)28-30/h1,8-10,13-16,30H,4-7,11-12H2,2H3,(H,28,29)(H,25,26,27)

Physicochemical Descriptors

Property Name Value
Molecular Formula C24H26N4O4
Molecular Weight 434.5
AlogP 4.2
Hydrogen Bond Acceptor 7.0
Hydrogen Bond Donor 3.0
Number of Rotational Bond 11.0
Polar Surface Area 105.6
Molecular species NEUTRAL
Aromatic Rings 3.0
Heavy Atoms 32.0

Bioactivity

Mechanism of Action Action Reference
Epidermal growth factor receptor erbB1 inhibitor INHIBITOR PubMed
Protein: Histone deacetylase

Description: Histone deacetylase 3

Organism : Homo sapiens

O15379 ENSG00000171720
Protein: Epidermal growth factor receptor erbB1

Description: Epidermal growth factor receptor

Organism : Homo sapiens

P00533 ENSG00000146648
Protein: Receptor protein-tyrosine kinase erbB-2

Description: Receptor tyrosine-protein kinase erbB-2

Organism : Homo sapiens

P04626 ENSG00000141736
Protein: Histone deacetylase

Description: Histone deacetylase 1

Organism : Homo sapiens

Q13547 ENSG00000116478
Protein: Histone deacetylase

Description: Histone deacetylase 7

Organism : Homo sapiens

Q8WUI4 ENSG00000061273
Protein: Histone deacetylase

Description: Histone deacetylase 2

Organism : Homo sapiens

Q92769 ENSG00000196591
Protein: Histone deacetylase

Description: Polyamine deacetylase HDAC10

Organism : Homo sapiens

Q969S8 ENSG00000100429
Protein: Histone deacetylase

Description: Histone deacetylase 11

Organism : Homo sapiens

Q96DB2 ENSG00000163517
Protein: Histone deacetylase

Description: Histone deacetylase 8

Organism : Homo sapiens

Q9BY41 ENSG00000147099
Protein: Histone deacetylase

Description: Histone deacetylase 6

Organism : Homo sapiens

Q9UBN7 ENSG00000094631
Protein: Histone deacetylase

Description: Histone deacetylase 9

Organism : Homo sapiens

Q9UKV0 ENSG00000048052
Protein: Histone deacetylase

Description: Histone deacetylase 5

Organism : Homo sapiens

Q9UQL6 ENSG00000108840
Assay Description Organism Bioactivity Reference
Inhibition of HDAC in human HeLa cell nuclear extract Homo sapiens 4.4 nM
Inhibition of EGFR None 2.4 nM
Inhibition of HER2 None 15.7 nM
Antiproliferative activity against human HCC827 cells after hrs by ATP content assay Homo sapiens 600.0 nM
Antiproliferative activity against human NCI-H358 cells after hrs by ATP content assay Homo sapiens 400.0 nM
Antiproliferative activity against human H460 cells after hrs by ATP content assay Homo sapiens 700.0 nM
Antiproliferative activity against human HepG2 cells after hrs by ATP content assay Homo sapiens 130.0 nM
Antiproliferative activity against human Hep3B2 cells after hrs by ATP content assay Homo sapiens 230.0 nM
Antiproliferative activity against human SKHEP1 cells after hrs by ATP content assay Homo sapiens 220.0 nM
Antiproliferative activity against human Capan1 cells after hrs by ATP content assay Homo sapiens 800.0 nM
Antiproliferative activity against human BxPC3 cells after hrs by ATP content assay Homo sapiens 270.0 nM
Antiproliferative activity against human MCF7 cells after hrs by ATP content assay Homo sapiens 550.0 nM
Antiproliferative activity against human MDA-MB-231 cells after hrs by ATP content assay Homo sapiens 100.0 nM
Antiproliferative activity against human SK-BR-3 cells after hrs by ATP content assay Homo sapiens 40.0 nM
Inhibition of human HDAC1 expressed in Escherichia coli Homo sapiens 4.5 nM
Inhibition of human HDAC2 expressed in Escherichia coli Homo sapiens 12.6 nM
Inhibition of human HDAC3 expressed in Escherichia coli Homo sapiens 9.1 nM
Inhibition of human HDAC8 expressed in Escherichia coli Homo sapiens 79.8 nM
Inhibition of human HDAC4 expressed in Escherichia coli Homo sapiens 13.2 nM
Inhibition of human HDAC5 expressed in Escherichia coli Homo sapiens 11.4 nM
Inhibition of human HDAC6 expressed in Escherichia coli Homo sapiens 5.1 nM
Inhibition of human HDAC7 expressed in Escherichia coli Homo sapiens 373.0 nM
Inhibition of human HDAC9 expressed in Escherichia coli Homo sapiens 67.2 nM
Inhibition of human HDAC10 expressed in Escherichia coli Homo sapiens 26.1 nM
Inhibition of KDR None 849.0 nM
Inhibition of Lyn None 840.0 nM
Inhibition of EGFR None 2.4 nM
Inhibition of erbB2 None 15.7 nM
Inhibition of HDAC None 4.4 nM
Inhibition of recombinant human amino-terminal GST-His6-fused EGFR expressed in baculovirus expression system assessed as phosphorylation using Biotin-PTP1B as substrate by HTScan assay Homo sapiens 2.4 nM
Inhibition of recombinant human amino-terminal GST-fused HER2 (Lys676-Val1255) expressed in baculovirus expression system using Biotin-FLT3 (Tyr589) peptide as substrate and ATP by HTScan assay Homo sapiens 16.4 nM
Inhibition of HDAC in human HeLa cell nuclear extract using COLOR DE LYS as substrate by fluorometric analysis Homo sapiens 4.2 nM
Inhibition of HDAC in human HeLa nuclear extract using Fluor de Lys as substrate after 1 hr by fluorimetric method Homo sapiens 4.4 nM
Inhibition of N-terminal GST-fused human EGFR (His672 to Ala1210 residues) expressed in baculovirus expression system using biotinylated PTP1B at Tyr66 as substrate preincubated for 5 mins followed by substrate addition measured after 30 mins by DELFIA Homo sapiens 2.4 nM
Inhibition of N-terminal GST-tagged human HER2 (Lys676 to Val1255 residues) expressed in baculovirus expression system using biotinylated FLT3 at Tyr589 as substrate preincubated for 5 mins followed by substrate addition measured after 30 mins by DELFIA method Homo sapiens 100.0 nM
Cytotoxicity against human MCF7 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 50.0 nM
Cytotoxicity against human MDA-MB-468 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 50.0 nM
Cytotoxicity against human SKBR3 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 50.0 nM
Cytotoxicity against human HCT116 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 50.0 nM
Cytotoxicity against human A431 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 50.0 nM
Cytotoxicity against human NCI-H1703 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 200.0 nM
Cytotoxicity against human NCI-H1975 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 100.0 nM
Cytotoxicity against human NCI-H2122 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 100.0 nM
Cytotoxicity against human NCI-H292 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 100.0 nM
Cytotoxicity against human NCI-H358 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 100.0 nM
Cytotoxicity against human NCI-H460 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 100.0 nM
Cytotoxicity against human HCC827 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 100.0 nM
Cytotoxicity against human BxPC3 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 270.0 nM
Cytotoxicity against human Capan1 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 100.0 nM
Cytotoxicity against human CFPAC cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 100.0 nM
Cytotoxicity against human MIAPaCa2 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 100.0 nM
Cytotoxicity against human PANC1 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 100.0 nM
Cytotoxicity against human 22Rv1 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 100.0 nM
Cytotoxicity against human PC3 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 100.0 nM
Inhibition of HDAC in human MDA-MB-468 cells assessed as acetylated histone H4 accumulation Homo sapiens 602.0 nM
Inhibition of EGFR phosphorylation at Tyr1068 in human MDA-MB-468 cells Homo sapiens 17.6 nM
Inhibition of HDAC in human MDA-MB-468 cells assessed as acetylated histone H3 accumulation Homo sapiens 464.0 nM
Cytotoxicity against human MDA-MB-231 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 50.0 nM
Cytotoxicity against human Caki1 cells assessed as growth inhibition by measuring ATP levels after 72 hrs by ATPlite assay Homo sapiens 50.0 nM
Induction of apoptosis in human HCT116 cells assessed as increase in caspase3/7 activity after 24 hrs Homo sapiens 170.0 nM
Induction of apoptosis in human SKBR3 cells assessed as increase in caspase3/7 activity after 24 hrs Homo sapiens 920.0 nM
Inhibition of human N-terminal GST-tagged human Abl1 (Pro118 to Ser553 residues) expressed in baculovirus expression system assessed as decrease in biotin signal transduction protein phosphorylation at Tyr160 at 5 uM preincubated for 5 mins followed by substrate addition measured after 30 mins by DELFIA method relative to control Homo sapiens 57.0 %
Inhibition of FGFR2 (unknown origin) at 5 uM relative to control Homo sapiens 73.0 %
Inhibition of FLT3 (unknown origin) at 5 uM relative to control Homo sapiens 85.0 %
Inhibition of N-terminal GST-His6-thrombin cleavage site-fused human VEGFR2 (Asp805 to Val1356 residues) expressed in baculovirus expression system at 5 uM using biotinylated gastrin precursor at Tyr87 as substrate preincubated for 5 mins followed by substrate addition measured after 30 mins by DELFIA method relative to control Homo sapiens 64.0 %
Inhibition of LCK (unknown origin) at 5 uM relative to control Homo sapiens 56.0 %
Inhibition of Lyn (unknown origin) at 5 uM relative to control Homo sapiens 95.0 %
Inhibition of Ret (unknown origin) at 5 uM relative to control Homo sapiens 93.0 %
Inhibition of N-terminal GST-tagged recombinant human HER2 (679 to 1255 residues) expressed in baculovirus infected insect Sf9 cells using poly (Glu:Tyr) 4:1 as substrate after 2 hrs Homo sapiens 188.0 nM
Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. Homo sapiens 961.0 nM
Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. Homo sapiens 739.0 nM
Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. Homo sapiens 482.0 nM
Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. Homo sapiens 142.0 nM
Inhibition of recombinant human LTA4H aminopeptidase activity expressed in Escherichia coli BL21 (DE3) pLysS assessed as formation of p-NA from Ala-p-NA at 10 uM preincubated for 10 mins followed by substrate addition measured after 10 mins Homo sapiens 50.0 %
Inhibition of recombinant human LTA4H Epoxide Hydrolase expressed in Escherichia coli BL21 (DE3) pLysS at 10 uM preincubated for 10 mins followed by addition of LTA4 as substrate measured after 15 mins by reverse-phase HPLC analysis Homo sapiens 50.0 %
Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of Caco-2 cells at 10 uM after 48 hours by high content imaging Homo sapiens 5.4 %
Inhibition of HDAC (unknown origin) in human HeLa cell nuclear extract using Color de Lys as substrate Homo sapiens 4.4 nM
Inhibition of EGFR (unknown origin) by HTscan assay Homo sapiens 2.4 nM
Inhibition of HER2 (unknown origin) Homo sapiens 15.7 nM
Inhibition of tubastatin-Alexa647-tracer binding to recombinant GST-tagged HDAC10 (unknown origin) measured after 1 hr by TR-FRET assay Homo sapiens 125.89 nM
Inhibition of dye-labeled tracer binding to HDAC10 (unknown origin) transfected in human HeLa cells measured after 2 hrs by nano-luciferase reporter gene-based BRET assay Homo sapiens 398.11 nM
SARS-CoV-2 3CL-Pro protease inhibition percentage at 20µM by FRET kind of response from peptide substrate Severe acute respiratory syndrome coronavirus 2 -16.29 % SARS-CoV-2 3CL-Pro protease inhibition percentage at 20µM by FRET kind of response from peptide substrate Severe acute respiratory syndrome coronavirus 2 -8.221 %
Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus 1.37 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus 1.07 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus 1.07 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus 1.37 %
Cytotoxicity against human MCF7 cells assessed as reduction in cell viability by MTT assay Homo sapiens 550.0 nM

Related Entries

Cross References

Resources Reference
ChEMBL CHEMBL598797
DrugBank DB12174
FDA SRS 1A7Y9MP123
Guide to Pharmacology 8894
PubChem 24756910
SureChEMBL SCHEMBL93769
ZINC ZINC000043196377