Structure

InChI Key XCPGHVQEEXUHNC-UHFFFAOYSA-N
Smiles COc1cc(NS(C)(=O)=O)ccc1Nc1c2ccccc2nc2ccccc12
InChI
InChI=1S/C21H19N3O3S/c1-27-20-13-14(24-28(2,25)26)11-12-19(20)23-21-15-7-3-5-9-17(15)22-18-10-6-4-8-16(18)21/h3-13,24H,1-2H3,(H,22,23)

Physicochemical Descriptors

Property Name Value
Molecular Formula C21H19N3O3S
Molecular Weight 393.47
AlogP 4.51
Hydrogen Bond Acceptor 5.0
Hydrogen Bond Donor 2.0
Number of Rotational Bond 5.0
Polar Surface Area 80.32
Molecular species NEUTRAL
Aromatic Rings 4.0
Heavy Atoms 28.0

Bioactivity

Mechanism of Action Action Reference
DNA topoisomerase II inhibitor INHIBITOR PubMed PubMed PubMed PubMed PubMed
Protein: DNA topoisomerase II

Description: DNA topoisomerase 2-alpha

Organism : Homo sapiens

P11388 ENSG00000131747
Protein: DNA topoisomerase II

Description: DNA topoisomerase 2-beta

Organism : Homo sapiens

Q02880 ENSG00000077097
Assay Description Organism Bioactivity Reference
Inhibitory activity against A549 cell line using MTT assay(Wild type p53) Homo sapiens 30.0 nM
Cell cytotoxicity was determined against human ovarian cancer (A2780) cell line Homo sapiens 350.0 nM
Concentration required to inhibit the cell growth by 50 % after 96 hr A2780 leukemic cells. Homo sapiens 100.0 nM
The compound was tested for the cytotoxicity against human leukemic CCRF-CEM cell lines Homo sapiens 139.0 nM
Inhibitory activity of compound for AA8 cells to reduce cell density by 50% (exposed to compound for 4 hours) Cricetulus griseus 0.6 nM
The compound was tested for the cytotoxicity against human leukemic CEM/VBL cell lines Homo sapiens 520.0 nM
Tested for the cytotoxicity against the repair deficient xrs-6 chinese hamster ovary cell line Cricetulus griseus 240.0 nM
The compound was tested for the cytotoxicity DC-3F cell lines Cricetulus griseus 4.0 nM
The compound was tested for the cytotoxicity against human leukemic DC-3F/ADII cell lines, activity is expressed as IC50 values. Homo sapiens 47.0 nM
In vitro inhibitior of human DNA topoisomerase II from HeLa cells. None 720.0 nM
Inhibitory activity against F460pv8/eto cell line using MTT assay Homo sapiens 40.0 nM
Inhibitory activity against H460pv8 cell line using MTT assay Homo sapiens 200.0 nM
In vitro for the inhibition of human colon tumor (HCT-8) cells. Homo sapiens 120.0 nM
In vitro for cytotoxicity against human colon tumor cells (HCT-8) in culture Homo sapiens 120.0 nM
In vitro cytotoxicity against human leukemic HL-60 cell line. Homo sapiens 21.0 nM
Cell cytotoxicity was determined against human promyelocytic leukemia (HL60) cell line Homo sapiens 400.0 nM
Inhibitory concentration required for cytotoxicity in J774.2 murine macrophage-like cells Mus musculus 900.6 nM
Inhibitory activity against Jurkat human leukemia cells Homo sapiens 37.0 nM
Inhibitory concentration against Human Jurkat leukemia (JLC) cell proliferation Homo sapiens 37.0 nM
Inhibitory concentration required to reduce human Jurkat leukemia (JLC sensitive, wild type) cell number to 50% of control cultures Homo sapiens 37.0 nM
Concentration required to inhibit 50% growth of human Jurkat cells Homo sapiens 37.0 nM
Concentration required to reduce the growth of human Jurkat cells to 50% of control cultures Homo sapiens 200.0 nM
Inhibition of KB cell growth in vitro Homo sapiens 0.3 ug.mL-1
Inhibitory concentration against L1210 leukemic cell proliferation over 24 hr Mus musculus 50.0 nM
In vitro for cytotoxicity against murine leukemia cells (L1210) Mus musculus 33.0 nM
In vitro inhibitory activity against Murine leukemia (L1210) Mus musculus 33.0 nM
Inhibitory activity against Lewis lung carcinoma cells Mus musculus 12.0 nM
Inhibitory concentration against Murine Lewis lung carcinoma (LLC) cell proliferation Mus musculus 12.0 nM
Inhibitory concentration required to reduce Lewis lung carcinoma cell number to 50% of control cultures Mus musculus 12.0 nM
Inhibitory activity against MDA-468 cell line using MTT assay (ER-, amplified EGFR, mutant p53) Homo sapiens 490.0 nM
Inhibitory activity against MCF-7 wt cell line using MTT assay (ER+,pgR+,wildtype p53) Homo sapiens 75.0 nM
Inhibitory activity of tested against Murine Lewis lung carcinoma Mus musculus 12.0 nM
Inhibitory activity against MCF7wt cell line using MTT assay Homo sapiens 75.0 nM
Inhibitory activity against MDA-231 cell line using MTT assay (ER-,EGFR+,mutant p53) Homo sapiens 140.0 nM
Inhibitory activity against NCI-H460 cell line using MTT assay Homo sapiens 60.0 nM
Inhibitory activity against NCI-H460 cell line using MTT assay(Wild type p53) Homo sapiens 60.0 nM
Inhibitory activity against NCI-H647 cell line using MTT assay(mutant p53) Homo sapiens 70.0 nM
Inhibitory activity against NCI-H322 cell line using MTT assay(mutant p53) Homo sapiens 210.0 nM
Inhibitory activity against NCI-H358 cell line using MTT assay(mutant p53) Homo sapiens 150.0 nM
In Vitro Cytotoxicity was measured by quantifying clonogenic survival in soft agar following a 1 hr transient exposure of P388 mouse leukemia cells to compound Mus musculus 150.0 nM
In vitro cell growth inhibitory activity against wild type P388 murine leukemia cell line (P388/W) Mus musculus 12.0 nM
In vitro cell growth inhibitory activity was determined against amsacrine-resistant P388 cell line (P388/A). Mus musculus 890.0 nM
In vitro cytotoxicity against P388 mouse leukemia cells Mus musculus 150.0 nM
In vitro cytotoxicity was evaluated following 1 hour transient exposure of P388 mouse leukemia cells to the compound Mus musculus 150.0 nM
In vitro cytotoxicity measured by quantifying clonogenic survival in soft agar following a 1-hour transient exposure of p388 mouse leukemia cells. Mus musculus 150.0 nM
Inhibitory activity against P388 murine leukemia cells Mus musculus 20.0 nM
Inhibitory activity against Murine p38 leukemia Mus musculus 20.0 nM
Inhibitory concentration to reduce cell number to 50% of Murine P388 leukemia cell culture Mus musculus 20.0 nM
Inhibitory concentration required to reduce murine p388 leukemia cell number to 50% of control cultures Mus musculus 20.0 nM
Inhibitory concentration IC50 against Plasmodium falciparum K1 by [3H]hypoxanthine uptake over 24 hr Plasmodium falciparum 600.0 nM
Inhibitory activity against SKBR-3 cell line using MTT assay (ER-amplified erB2,mutant p53) Homo sapiens 60.0 nM
Inhibitory activity against T47D cell line using MTT assay (ER+,mutant p53) Homo sapiens 220.0 nM
Inhibition of topoisomerase II purified from HeLa cells Homo sapiens 720.0 nM
Compound was tested for topoisomerase II inhibition in purified HeLa cells by SDS/K+ precipitation method None 720.0 nM
Inhibitory activity against HeLa cell Topoisomerase II None 720.0 nM
Tested for inhibition of topoisomerase II isolated from HeLa cells by DNA-cleavage assay None 720.0 nM
Tested for inhibitory activity against Topoisomerase II isolated from HeLa cells by using SDS-K+ precipitation method None 720.0 nM
Cytotoxicity against CHO cell line xrs6 Cricetulus griseus 240.0 nM
Inhibitory activity against ZR-75-1 cell line using MTT assay (ER+,pgr+,mutant p53) Homo sapiens 180.0 nM
Inhibitory activity in a cell-free assay of DNA cleavage mediated by purified HeLa cell topoisomerase II. None 720.0 nM
Cytotoxicity against human HCT116 cells by XTT assay Homo sapiens 700.0 nM
Cytotoxicity against human K562 cells after 5 days by XTT assay Homo sapiens 23.0 nM
Antiproliferative activity against human HeLa cells after 72 hrs by trypan blue test Homo sapiens 12.0 nM
Antiproliferative activity against human HL60 cells after 72 hrs by trypan blue test Homo sapiens 5.1 nM
Antiproliferative activity against human HT-29 cells after 96 hrs by MTT assay Homo sapiens 559.0 nM
Antiproliferative activity against mouse P388 cells after 48 hrs by MTT assay Mus musculus 229.0 nM
Cytotoxicity against human M4Beu cells by resazurin reduction test Homo sapiens 740.0 nM
Cytotoxicity against human DLD1 cells by resazurin reduction test Homo sapiens 570.0 nM
Cytotoxicity against human Jurkat cells by resazurin reduction test Homo sapiens 80.0 nM
Cytotoxicity against mouse B16F0 cells by resazurin reduction test Mus musculus 80.0 nM
Cytotoxicity against human M4Beu cells by Hoechst test Homo sapiens 400.0 nM
Cytotoxicity against mouse B16F0 cells by Hoechst test Mus musculus 40.0 nM
Cytotoxicity against human DLD1 cells by Hoechst test Homo sapiens 80.0 nM
Cytotoxicity against human Jurkat cells by Hoechst test Homo sapiens 20.0 nM
Cytotoxicity against human CCRF-CEM cells after 72 hrs Homo sapiens 130.0 nM
Inhibition of human ERG potassium channel Homo sapiens 210.0 nM
Inhibition of 4-(4-(dimethylamino)styryl)-N-methylpyridinium uptake at human OCT1 expressed in HEK293 cells at 100 uM by confocal microscopy Homo sapiens 68.4 %
Inhibition of rabbit aldehyde oxidase Oryctolagus cuniculus 60.0 nM
Inhibition of human ERG Homo sapiens 208.93 nM
Growth inhibition in human HL60 cells after 72 hrs by trypan blue assay Homo sapiens 6.0 nM
Growth inhibition in human A431 cells after 72 hrs by trypan blue assay Homo sapiens 170.0 nM
Growth inhibition in human HeLa cells after 72 hrs by trypan blue assay Homo sapiens 12.0 nM
Antiproliferative activity against human DU145 cells after 72 hrs by MTT assay Homo sapiens 300.0 nM
Antiproliferative activity against human SF295 cells after 72 hrs by MTT assay Homo sapiens 500.0 nM
Antiproliferative activity against human HCT15 cells after 72 hrs by MTT assay Homo sapiens 300.0 nM
Antiproliferative activity against human SW620 cells after 72 hrs by MTT assay Homo sapiens 300.0 nM
Antiproliferative activity against human HCT8 cells after 72 hrs by MTT assay Homo sapiens 300.0 nM
Antiproliferative activity against human HL60 cells after 72 hrs by MTT assay Homo sapiens 80.0 nM
Antiproliferative activity against human HeLa cells after 48 hrs by MTT assay Homo sapiens 340.0 nM
Antiproliferative activity against human HCT116 cells after 48 hrs by MTT assay Homo sapiens 930.0 nM
Antiproliferative activity against human CCRF-CEM cells after 48 hrs by MTT assay Homo sapiens 180.0 nM
Antiproliferative activity against human K562 cells after 48 hrs by MTT assay Homo sapiens 880.0 nM
Antiproliferative activity against human U937 cells after 48 hrs by MTT assay Homo sapiens 610.0 nM
Inhibition of human topoisomerase-2 at 10 uM using supercoiled pBR322 DNA as substrate after 10 to 15 mins by ethidium bromide staining based electrophoresis relative to control Homo sapiens 56.9 %
Antiproliferative activity against human U937 cells after 48 hrs by MTT assay Homo sapiens 610.0 nM
Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of Caco-2 cells at 10 uM after 48 hours by high content imaging Homo sapiens -4.19 %
Cytotoxicity against human MCF7 cells assessed as reduction in cell viability incubated for 48 hrs by MTT assay Homo sapiens 910.0 nM
Cytotoxicity against human T47D cells assessed as reduction in cell viability incubated for 48 hrs by MTT assay Homo sapiens 940.0 nM
Antiproliferative against human CCRF-CEM cells incubated for 72 hrs by MTT assay Homo sapiens 30.0 nM
Antiproliferative against human K562 cells incubated for 72 hrs by MTT assay Homo sapiens 710.0 nM
Antiproliferative against human U937 cells incubated for 72 hrs by MTT assay Homo sapiens 80.0 nM
Inhibition of retinal reductase in Sprague-Dawley rat liver microsomes at 100 uM using all-trans retinaldehyde and NADPH by HPLC analysis relative to control Rattus norvegicus 22.0 %
SARS-CoV-2 3CL-Pro protease inhibition percentage at 20µM by FRET kind of response from peptide substrate Severe acute respiratory syndrome coronavirus 2 21.46 % SARS-CoV-2 3CL-Pro protease inhibition percentage at 20µM by FRET kind of response from peptide substrate Severe acute respiratory syndrome coronavirus 2 -0.52 % SARS-CoV-2 3CL-Pro protease inhibition percentage at 20µM by FRET kind of response from peptide substrate Severe acute respiratory syndrome coronavirus 2 -1.981 %
Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus 0.06 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus 0.2 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus 3.04 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus 3.04 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus 0.06 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus 0.2 %

Cross References

Resources Reference
ChEBI 2687
ChEMBL CHEMBL43
DrugBank DB00276
DrugCentral 203
FDA SRS 00DPD30SOY
Human Metabolome Database HMDB0014421
KEGG C01553
PDB ASW
PharmGKB PA10309
PubChem 2179
SureChEMBL SCHEMBL4047
ZINC ZINC000003812923