Structure

InChI Key LKCWBDHBTVXHDL-RMDFUYIESA-N
Smiles NCC[C@H](O)C(=O)N[C@@H]1C[C@H](N)[C@@H](O[C@H]2O[C@H](CN)[C@@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O[C@H]1O[C@H](CO)[C@@H](O)[C@H](N)[C@H]1O
InChI
InChI=1S/C22H43N5O13/c23-2-1-8(29)20(36)27-7-3-6(25)18(39-22-16(34)15(33)13(31)9(4-24)37-22)17(35)19(7)40-21-14(32)11(26)12(30)10(5-28)38-21/h6-19,21-22,28-35H,1-5,23-26H2,(H,27,36)/t6-,7+,8-,9+,10+,11-,12+,13+,14+,15-,16+,17-,18+,19-,21+,22+/m0/s1

Physicochemical Descriptors

Property Name Value
Molecular Formula C22H43N5O13
Molecular Weight 585.61
AlogP -8.42
Hydrogen Bond Acceptor 17.0
Hydrogen Bond Donor 13.0
Number of Rotational Bond 10.0
Polar Surface Area 331.94
Molecular species BASE
Aromatic Rings 0.0
Heavy Atoms 40.0
Assay Description Organism Bioactivity Reference
Inhibitory activity against the displacement of Picogreen from fMet-tRNA(fMet) by the aminoglycoside Staphylococcus aureus 160.0 nM
Maximal inhibition against the displacement of Picogreen from fMet-tRNA(fMet) by the aminoglycoside Staphylococcus aureus 85.0 %
Maximal inhibition of the aminoglycoside on Staphylococcus aureus IF-2 binding to fMet-tRNA(fMet) Staphylococcus aureus 43.0 %
Inhibition of purified telomerase of Euplotes aediculatus at 50 uM Euplotes aediculatus 0.0 %
Inhibition of telomerase after assembly using recombinant Tetraymena thermophilia TR and TERT at 50 uM Tetrahymena thermophila 0.0 %
Inhibition of telomerase before assembly using recombinant Tetraymena thermophilia TR and TERT at 50 uM Tetrahymena thermophila 0.0 %
Inhibition of human telomerase before assembly using recombinant hTR and hTERT at 50 uM Homo sapiens 25.0 %
Binding affinity to A-site RNA None 50.0 nM
Cytotoxicity against african green monkey Vero cells after 72 hrs by MTT assay Chlorocebus sabaeus 62.5 ug.mL-1
Antitubercular activity against Mycobacterium tuberculosis H37Rv by BacTiter-Gl Microbial Cell Viability assay Mycobacterium tuberculosis H37Rv 70.0 nM
Antitubercular activity against Mycobacterium tuberculosis H37Rv by microdilution alamar Blue broth assay Mycobacterium tuberculosis H37Rv 120.0 nM
Antimicrobial activity against Mycobacterium tuberculosis H37Rv after 7 days by BacTiter-Glo assay Mycobacterium tuberculosis H37Rv 70.0 nM
Antimycobacterial activity against Mycobacterium tuberculosis H37Rv assessed as growth inhibition by Alamar Blue staining-based broth microdilution assay Mycobacterium tuberculosis H37Rv 70.0 nM
Antimycobacterial activity against Mycobacterium tuberculosis H37Rv ATCC 27294 after 7 days by microplate Alamar blue assay Mycobacterium tuberculosis H37Rv 0.07 ug.mL-1
Antimycobacterial activity against Mycobacterium tuberculosis H37Rv ATCC 27294 at 0.08 ug/ml after 7 days by microplate Alamar blue assay relative to control Mycobacterium tuberculosis H37Rv 79.8 %
Antimycobacterial activity against Mycobacterium tuberculosis H37Rv ATCC 27294 at 0.16 to 0.31 ug/ml after 7 days by microplate Alamar blue assay relative to control Mycobacterium tuberculosis H37Rv 96.0 %
Antimycobacterial activity against Mycobacterium tuberculosis H37Rv ATCC 27294 at 0.63 ug/ml after 7 days by microplate Alamar blue assay relative to control Mycobacterium tuberculosis H37Rv 97.3 %
Antimycobacterial activity against Mycobacterium tuberculosis H37Rv ATCC 27294 at 1.25 to 5 ug/ml after 7 days by microplate Alamar blue assay relative to control Mycobacterium tuberculosis H37Rv 98.0 %
Antimycobacterial activity against Mycobacterium tuberculosis H37Rv assessed as growth inhibition by microdilution AlamarBlue broth assay Mycobacterium tuberculosis H37Rv 70.0 nM
Antimicrobial activity against Mycobacterium tuberculosis H37Rv ATCC 27294 incubated for 7 days by BacTiter-Glo cell viability assay Mycobacterium tuberculosis H37Rv 102.0 nM
Antibacterial activity against Pseudomonas aeruginosa PA7 DSM 24068 after 18 hrs Pseudomonas aeruginosa PA7 3.8 ug.mL-1
Antimicrobial activity against Mycobacterium tuberculosis H37Rv by Alamar blue assay Mycobacterium tuberculosis H37Rv 70.0 nM
Cytotoxicity against monkey Vero cells assessed as decrease in cell viability after 72 hrs by MTT assay Chlorocebus sabaeus 6.25 ug.mL-1
Antimycobacterial activity against Mycobacterium tuberculosis H37Rv Mycobacterium tuberculosis H37Rv 80.0 nM
Binding affinity to 16S rRNA A-site in Escherichia coli S30 extract assessed as inhibition of translation measured after 30 mins by coupled transcription/translation-based luciferase reporter gene assay Escherichia coli 70.0 nM
Antimycobacterial activity against Mycobacterium tuberculosis H37Rv assessed as inhibition of bacterial growth by microdilution alamar blue broth assay Mycobacterium tuberculosis 70.0 nM
Antimycobacterial activity against Mycobacterium tuberculosis H37Rv assessed as inhibition of bacterial growth at 0.17 mM by microdilution alamar blue broth assay relative to control Mycobacterium tuberculosis 30.0 %

Related Entries

Cross References

Resources Reference
ChEBI 2637
ChEMBL CHEMBL177
DrugBank DB00479
DrugCentral 157
FDA SRS 84319SGC3C
Human Metabolome Database HMDB0014622
Guide to Pharmacology 10894
KEGG C06820
PDB AKN
PharmGKB PA164744372
PubChem 37768
SureChEMBL SCHEMBL2985
ZINC ZINC000008214483