Structure

InChI Key XUBOMFCQGDBHNK-UHFFFAOYSA-N
Smiles COc1c(N2CCNC(C)C2)c(F)cc2c(=O)c(C(=O)O)cn(C3CC3)c12
InChI
InChI=1S/C19H22FN3O4/c1-10-8-22(6-5-21-10)16-14(20)7-12-15(18(16)27-2)23(11-3-4-11)9-13(17(12)24)19(25)26/h7,9-11,21H,3-6,8H2,1-2H3,(H,25,26)

Physicochemical Descriptors

Property Name Value
Molecular Formula C19H22FN3O4
Molecular Weight 375.4
AlogP 1.98
Hydrogen Bond Acceptor 6.0
Hydrogen Bond Donor 2.0
Number of Rotational Bond 4.0
Polar Surface Area 83.8
Molecular species ZWITTERION
Aromatic Rings 2.0
Heavy Atoms 27.0

Bioactivity

Mechanism of Action Action Reference
DNA gyrase inhibitor INHIBITOR FDA
Assay Description Organism Bioactivity Reference
Clonogenic cytotoxicity against Chinese hamster V-79 cells Cricetulus griseus 85.0 ug.mL-1
Inhibitory activity against wild type Escherichia coli gyrase Escherichia coli 500.0 nM
Inhibition of Mycobacterium tuberculosis DNA gyrase Mycobacterium tuberculosis 4.0 ug.mL-1
Cytotoxicity against Vero cell line Chlorocebus sabaeus 62.5 ug.mL-1
Inhibition of Escherichia coli gyrase Escherichia coli 500.0 nM
Suppression of TNF alpha-stimulated IL8 secretion in human PC3 cells at 16 ug/ml added 30 mins after stimulation Homo sapiens 25.0 %
Inhibition of Mycobacterium leprae recombinant DNA gyrase expressed in Escherichia coli assessed as inhibition of pBR322 DNA supercoiling Mycobacterium leprae 2.0 ug.mL-1
Inhibition of Mycobacterium leprae wild type DNA gyrase A2B2 assessed as DNA supercoiling inhibition Mycobacterium leprae 3.5 ug.mL-1
Inhibition of Mycobacterium leprae DNA gyrase subunit A G89C mutant assessed as DNA supercoiling inhibition Mycobacterium leprae 20.0 ug.mL-1
Inhibition of Mycobacterium leprae DNA gyrase subunit A A91V mutant assessed as DNA supercoiling inhibition Mycobacterium leprae 20.0 ug.mL-1
Inhibition of Mycobacterium leprae wild type DNA gyrase subunit B D205N mutant assessed as DNA supercoiling inhibition Mycobacterium leprae 4.5 ug.mL-1
Inhibition of Staphylococcus aureus wild type DNA topoisomerase 4 Staphylococcus aureus 1.85 ug.mL-1
Inhibition of Staphylococcus aureus DNA topoisomerase 4 Ser80Phe mutant Staphylococcus aureus 22.5 ug.mL-1
Inhibition of Staphylococcus aureus wild type DNA gyrase Staphylococcus aureus 3.22 ug.mL-1
Inhibition of Staphylococcus aureus DNA gyrase Ser84Leu mutant Staphylococcus aureus 287.0 ug.mL-1
PUBCHEM_BIOASSAY: A screen for inhibitors of the PhoP region in Salmonella Typhimurium using a modified counterscreen. (Class of assay: confirmatory) [Related pubchem assays: 2253, 1863, 1874 ] None 440.0 nM
PUBCHEM_BIOASSAY: High Throughput Screen to Identify Inhibitors of Mycobacterium tuberculosis H37Rv. (Class of assay: confirmatory) None 195.0 nM
PUBCHEM_BIOASSAY: A small molecule screen for inhibitors of the PhoP region in Salmonella Typhimurium. (Class of assay: confirmatory) [Related pubchem assays: 2253, 1981, 1874 ] None 580.0 nM
PUBCHEM_BIOASSAY: Luminescence Microorganism-Based Dose Confirmation HTS to Identify Compounds Cytotoxic to SK(-)GAS Group A Streptococcus. (Class of assay: confirmatory) [Related pubchem assays: 1677 (Project Summary), 1662 (Primary HTS)] Streptococcus 660.0 nM
PUBCHEM_BIOASSAY: Luminescence Microorganism-Based Dose Confirmation HTS to Identify Inhibitors of Streptokinase Promotor Activity. (Class of assay: confirmatory) [Related pubchem assays: 1677 (Project Summary), 1662 (Primary HTS)] Streptococcus pyogenes M1 GAS 668.0 nM
PUBCHEM_BIOASSAY: A small molecule screen for inhibitors of the PhoP region in Salmonella typhi. (Class of assay: confirmatory) [Related pubchem assays: 1864, 2252, 1985 ] None 290.0 nM
PUBCHEM_BIOASSAY: A screen for inhibitors of the PhoP region in Salmonella Typhi using a modified counterscreen. (Class of assay: confirmatory) None 230.0 nM
Anti-inflammatory activity in Homo sapiens (human) T lymphocytes assessed as inhibition of PHA-induced [3H] thymidine uptake incubated for 72 hr prior to [3H]thymidine addition measured after 18 hr by liquid scintillation method Homo sapiens 50.0 ug.mL-1
Anti-inflammatory activity in Homo sapiens (human) T lymphocytes assessed as inhibition of PHA-induced [3H] thymidine uptake at 3.12 ug/ml incubated for 72 hr prior to [3H]thymidine addition measured after 18 hr by liquid scintillation method Homo sapiens -71.1 %
Anti-inflammatory activity in Homo sapiens (human) T lymphocytes assessed as inhibition of PHA-induced [3H] thymidine uptake at 12.5 ug/ml incubated for 72 hr prior to [3H]thymidine addition measured after 18 hr by liquid scintillation method Homo sapiens -97.9 %
Anti-inflammatory activity in Homo sapiens (human) T lymphocytes assessed as inhibition of PHA-induced [3H] thymidine uptake at 50 ug/ml incubated for 72 hr prior to [3H]thymidine addition measured after 18 hr by liquid scintillation method Homo sapiens -25.2 %
Antioxidant activity in Homo sapiens (human) whole blood assessed as inhibition of ROS production after 30 min by luminol-enhanced chemiluminescence assay Homo sapiens 31.0 ug.mL-1
Antioxidant activity in Homo sapiens (human) whole blood assessed as inhibition of ROS production at 12.5 ug/ml after 30 min by luminol-enhanced chemiluminescence assay Homo sapiens 19.7 %
Antioxidant activity in Homo sapiens (human) whole blood assessed as inhibition of ROS production at 50 ug/ml after 30 min by luminol-enhanced chemiluminescence assay Homo sapiens 66.0 %
Antioxidant activity in Homo sapiens (human) whole blood assessed as inhibition of ROS production at 100 ug/ml after 30 min by luminol-enhanced chemiluminescence assay Homo sapiens 84.7 %
Inhibition of Mycobacterium leprae DNA gyrase GyrA/GyrB assessed as reduction of enzyme supercoiling activity using relaxed pBR322 DNA substrate incubated for 2 hrs at 30 degC by ethidium bromide based gel electrophoresis Mycobacterium leprae 3.0 ug.mL-1
Inhibition of Mycobacterium tuberculosis DNA gyrase GyrA/GyrB assessed as reduction of enzyme supercoiling activity using relaxed pBR322 DNA substrate incubated for 1 hr at 37 degC by ethidium bromide based gel electrophoresis Mycobacterium tuberculosis 3.0 ug.mL-1
Inhibition of sodium fluorescein uptake in OATP1B1-transfected CHO cells at an equimolar substrate-inhibitor concentration of 10 uM Cricetulus griseus 121.89 %
Inhibition of sodium fluorescein uptake in OATP1B3-transfected CHO cells at an equimolar substrate-inhibitor concentration of 10 uM Cricetulus griseus 96.61 %
Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of Caco-2 cells at 10 uM after 48 hours by high content imaging Homo sapiens -3.99 %
Inhibition of Mycobacterium tuberculosis DNA gyrase Mycobacterium tuberculosis 5.0 ug.mL-1
SARS-CoV-2 3CL-Pro protease inhibition percentage at 20µM by FRET kind of response from peptide substrate Severe acute respiratory syndrome coronavirus 2 22.31 % SARS-CoV-2 3CL-Pro protease inhibition percentage at 20µM by FRET kind of response from peptide substrate Severe acute respiratory syndrome coronavirus 2 8.909 %
Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus 0.15 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus 0.09 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus 0.09 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus 0.15 %

Related Entries

Cross References

Resources Reference
ChEBI 5280
ChEMBL CHEMBL31
DrugBank DB01044
DrugCentral 1280
FDA SRS 81485Y3A9A
Human Metabolome Database HMDB0015178
Guide to Pharmacology 10816
KEGG C07661
PharmGKB PA449738
PubChem 5282384
SureChEMBL SCHEMBL22591
ZINC ZINC38197764