Structure

InChI Key DYDCUQKUCUHJBH-UWTATZPHSA-N
Smiles N[C@@H]1CONC1=O
InChI
InChI=1S/C3H6N2O2/c4-2-1-7-5-3(2)6/h2H,1,4H2,(H,5,6)/t2-/m1/s1

Physicochemical Descriptors

Property Name Value
Molecular Formula C3H6N2O2
Molecular Weight 102.09
AlogP -1.62
Hydrogen Bond Acceptor 3.0
Hydrogen Bond Donor 2.0
Number of Rotational Bond 0.0
Polar Surface Area 64.35
Molecular species ACID
Aromatic Rings 0.0
Heavy Atoms 7.0

Pharmacology

Mechanism of Action Action Reference
Alanine racemase inhibitor INHIBITOR ISBN PubMed
Targets EC50(nM) IC50(nM) Kd(nM) Ki(nM) Inhibition(%)
Enzyme Isomerase
- - - - 10
Ion channel Ligand-gated ion channel Ionotropic glutamate receptor NMDA receptor
18100 2300 - - -
Assay Description Organism Bioactivity Reference
Inhibition of human aquaporin 4 M23 isoform expressed in Xenopus laevis oocytes at 20 uM Homo sapiens 3.0 %
Antimycobacterial activity against Mycobacterium tuberculosis H37Ra at 50 ug/ml after 6 days by microplate alamar blue assay Mycobacterium tuberculosis H37Ra 100.0 %
Antimycobacterial activity against Mycobacterium tuberculosis H37Ra at 25 ug/ml after 6 days by microplate alamar blue assay Mycobacterium tuberculosis H37Ra 80.0 %
Antimycobacterial activity against Mycobacterium tuberculosis H37Ra at 5 ug/ml after 6 days by microplate alamar blue assay Mycobacterium tuberculosis H37Ra 50.0 %
Antitubercular activity against Mycobacterium bovis BCG at 10 ug/ml after 6 days by microplate alamar blue assay Mycobacterium bovis BCG 71.0 %
Antitubercular activity against Mycobacterium bovis BCG at 5 ug/ml after 6 days by microplate alamar blue assay Mycobacterium bovis BCG 50.0 %
Antitubercular activity against Mycobacterium tuberculosis H37Ra at 10 ug/ml after 6 days by microplate alamar blue assay Mycobacterium tuberculosis H37Ra 67.0 %
Antitubercular activity against Mycobacterium tuberculosis H37Ra at 5 ug/ml after 6 days by microplate alamar blue assay Mycobacterium tuberculosis H37Ra 50.0 %
Cytotoxicity against african green monkey Vero cells after 72 hrs by MTT assay Chlorocebus sabaeus 62.5 ug.mL-1
Cytotoxicity against african green monkey Vero cells after 72 hrs by MTS-PMS assay Chlorocebus sabaeus 100.0 ug.mL-1
Antimycobacterial activity against Mycobacterium tuberculosis H37Rv ATCC 27294 after 7 days by microplate Alamar blue assay Mycobacterium tuberculosis H37Rv 12.47 ug.mL-1
Antimycobacterial activity against Mycobacterium tuberculosis H37Rv ATCC 27294 at 12.5 ug/ml after 7 days by microplate Alamar blue assay relative to control Mycobacterium tuberculosis H37Rv 51.0 %
Antimycobacterial activity against Mycobacterium tuberculosis H37Rv ATCC 27294 at 25 ug/ml after 7 days by microplate Alamar blue assay relative to control Mycobacterium tuberculosis H37Rv 93.9 %
Antimycobacterial activity against Mycobacterium tuberculosis H37Rv ATCC 27294 at 50 ug/ml after 7 days by microplate Alamar blue assay relative to control Mycobacterium tuberculosis H37Rv 96.3 %
Antimycobacterial activity against Mycobacterium tuberculosis H37Rv ATCC 27294 at 100 ug/ml after 7 days by microplate Alamar blue assay relative to control Mycobacterium tuberculosis H37Rv 97.7 %
Inhibition of alanine racemase in Mycobacterium tuberculosis H37Rv assessed as remaining activity at MIC preincubated for 16 hrs followed by L-Ala-[13C]-[3H] addition measured over 8 hrs by LC-MS/MS analysis Mycobacterium tuberculosis H37Rv 10.0 %
Cytotoxicity against monkey Vero cells assessed as decrease in cell viability after 72 hrs by MTT assay Chlorocebus sabaeus 6.25 ug.mL-1
Antibacterial activity against Staphylococcus aureus MRSA ATCC 43300 (CO-ADD:GP_020); MIC in CAMBH media, using NBS plates, by OD(600) Staphylococcus aureus subsp. aureus 14.71 %
Antibacterial activity against Escherichia coli ATCC 25922 (CO-ADD:GN_001); MIC in CAMBH media using NBS plates, by OD(600) Escherichia coli 1.47 %
Antibacterial activity against Klebsiella pneumoniae MDR ATCC 70063 (CO-ADD:GN_003); MIC in CAMBH media using NBS plates, by OD(600) Klebsiella pneumoniae 12.0 %
Antibacterial activity against Pseudomonas aeruginosa ATCC 27853 (CO-ADD:GN_042); MIC in CAMBH media using NBS plates, by OD(600) Pseudomonas aeruginosa 60.23 %
Antibacterial activity against Acinetobacter baumannii ATCC 19606 (CO-ADD:GN_034); MIC in CAMBH media using NBS plates, by OD600 Acinetobacter baumannii 25.21 %
Antifungal activity against Candida albicans ATCC 90028 (CO-ADD:FG_001); MIC in YNB media using NBS plates, by OD630 Candida albicans 1.72 %
Antifungal activity against Cryptococcus neoformans H99 ATCC 208821 (CO-ADD:FG_002); MIC in YNB media using NBS plates, by Resazurin OD(600-570) Cryptococcus neoformans -5.65 %
Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of Caco-2 cells at 10 uM after 48 hours by high content imaging Homo sapiens -2.21 %
Inhibition of Enterococcus faecalis JH2-2 C-terminal 6His-tagged DdlB expressed in Escherichia coli LMG194 at 10 uM preincubated for 30 mins followed by substrate addition and measured after 20 mins by Biomol Green reagent assay relative to control Enterococcus faecalis 30.0 %
SARS-CoV-2 3CL-Pro protease inhibition percentage at 20µM by FRET kind of response from peptide substrate Severe acute respiratory syndrome coronavirus 2 23.75 % SARS-CoV-2 3CL-Pro protease inhibition percentage at 20µM by FRET kind of response from peptide substrate Severe acute respiratory syndrome coronavirus 2 29.49 %
Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus 0.17 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus -0.09 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus 0.17 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging Chlorocebus sabaeus -0.09 %
Antimycobacterial activity against Mycobacterium bovis BCG assessed as inhibition of bacterial growth at 10 ug/ml measured by microplate alamar blue assay Mycobacterium tuberculosis variant bovis BCG 71.0 %
Antimycobacterial activity against Mycobacterium bovis BCG assessed as inhibition of bacterial growth at 5 ug/ml measured by microplate alamar blue assay Mycobacterium tuberculosis variant bovis BCG 50.0 %
Antimycobacterial activity against Mycobacterium tuberculosis H37Ra assessed as inhibition of bacterial growth at 10 ug/ml measured by microplate alamar blue assay Mycobacterium tuberculosis 67.0 %
Antimycobacterial activity against Mycobacterium tuberculosis H37Ra assessed as inhibition of bacterial growth at 5 ug/ml measured by microplate alamar blue assay Mycobacterium tuberculosis 50.0 %

Cross References

Resources Reference
ChEBI 40009
ChEMBL CHEMBL771
DrugBank DB00260
DrugCentral 759
FDA SRS 95IK5KI84Z
Human Metabolome Database HMDB0014405
Guide to Pharmacology 9489
KEGG C08057
PDB 4AX
PubChem 6234
SureChEMBL SCHEMBL34322
ZINC ZINC000034676245